Trying to jump to a hot cue before they have loaded in erases the hot cue and sets a blank hot cue at the start of the track (attachment cue 2)

That's not possible, unless you used the keyboard shortcut to delete it - see attached.

Yeah im using the keyboard shortcuts. Is quite annoying to lose cue points when listening through tracks

Don't use Cmd/Cntrl then. Just tap the number on its own to jump to the cue.

If you want to delete it, then you can use cmd/cntrl.

Or do you mean that's what you're doing but it's deleting it during loading?

I've just prevented this from happening while the cues are loading. That should solve the issue. Will be in the next release!

Thanks! Yeah I use hotkeys to jump around the tracks and doing that accidentally too early (which is easy to do since hot cue loading times arent consistent across tracks) would overwrite the cue.